Ball JD, Elbadry MA, Telisma T, White SK, Chavannes S, Anilis MG, Prosperi M, Cummings DAT, Lednicky JA, Morris JG, Beau de Rochars M.

Clinical and Epidemiologic Patterns of Chikungunya Virus Infection and Coincident Arboviral Disease in a School Cohort in Haiti, 2014-2015.

Clinical Infectious Diseases, 2019; 68: 919-926. 10.1093/cid/ciy582.
Haw DJ, Cummings DAT, Lessler J, Salje H, Read JM, Riley S

Differential mobility and local variation in infection attack rate.

PLoS Computational Biology, 2019; : . https://doi.org/10.1371/journal.pcbi.1006600
Isabel Rodriguez-Barraquer1,*, Federico Costa2,3,4,*, Eduardo J. M. Nascimento, Nivison Nery Júnior, Priscila M. S. Castanha, Gielson Almeida Sacramento, Jaqueline Cruz, Mayara Carvalho, Daiana De Olivera, José E. Hagan, Haritha Adhikarla, Elsio A. Wunder Jr., Danilo F. Coêlho, Sasha R. Azar, Shannan L. Rossi, Nikos Vasilakis, Scott C. Weaver, Guilherme S. Ribeiro, Angel Balmaseda, Eva Harris, Maurício L. Nogueira, Mitermayer G. Reis, Ernesto T. A. Marques, Derek A. T. Cummings, Albert I. Ko

Impact of preexisting dengue immunity on Zika virus emergence in a dengue endemic region.

Science, 2019; 363: 607-610. 10.1126/science.aav6618
Kriagsak Ruchusatsawat, Pattara Wongjaroen, Arisara Posanacharoen, Isabel Rodriguez-Barraquer, Somchai Sangkitporn, Derek AT Cummings

Long-term circulation of Zika virus in Thailand: an observational study

The Lancet Infectious Diseases, 2019; : . https://doi.org/10.1016/S1473-3099(18)30718-7
Chadsuthi S, Althouse BM, Iamsirithaworn S, Triampo W, Grantz KH, Cummings DAT

Travel distance and human movement predict paths of emergence and spatial spread of chikungunya in Thailand.

Epidemiology and Infection, 2018; 146: 1654-1662. 10.1017/S0950268818001917
Smith MK, Graham M, Latkin CA, Mehta SH, Cummings DAT

Quantifying potentially infectious sharing patterns among people who inject drugs in Baltimore, USA.

Epidemiology and Infection, 2018; 146: 1845-1853. 10.1017/S0950268818002042.
Kucharski AJ, Lessler J, Cummings DAT, Riley S

Timescales of influenza A/H3N2 antibody dynamics.

PLoS Biology, 2018; 16: . 10.1371/journal.pbio.2004974.
Katzelnick LC, Coello Escoto A, McElvany BD, Chávez C, Salje H, Luo W, Rodriguez-Barraquer I, Jarman R, Durbin AP, Diehl SA, Smith DJ, Whitehead SS, Cummings DAT

Viridot: An automated virus plaque (immunofocus) counter for the measurement of serological neutralizing responses with application to dengue virus.

PLoS Negl Trop Dis, 2018; 12: 10. 10.1371/journal.pntd.000686
Kraemer MUG, Cummings DAT, Funk S, Reiner RC, Faria NR, Pybus OG, Cauchemez S

Reconstruction and prediction of viral disease epidemics.

Epidemiology and Infection, 2018; : . 10.1017/S0950268818002881
Cortes MC, Cauchemez S, Lefrancq N, Luby SP, Jahangir Hossain M, Sazzad HMS, Rahman M, Daszak P, Salje H, Gurley ES

Characterization of the Spatial and Temporal Distribution of Nipah Virus Spillover Events in Bangladesh, 2007-2013.

J Infect Dis, 2018; 217(9): 1390-1394. 10.1093/infdis/jiy015
Azman AS, Luquero FJ, Salje H, Naibei Mbaïbardoum N, Adalbert N, Ali M, Bertuzzo E, Finger F, Toure B, Massing LA, Ramazani R, Saga B, Allan M, Olson D, Leglise J, Porten K, Lessler J

Micro-hotspots of Risk in Urban Cholera Epidemics.

J Infect Dis, 2018; : . 10.1093/infdis/jiy283
Courtejoie N, Salje H, Durand B, Zanella G, Cauchemez S

Using serological studies to reconstruct the history of bluetongue epidemic in French cattle under successive vaccination campaigns.

Epidemics, 2018; S1755-4365(17): 30172-X. 10.1016/j.epidem.2018.05.005
Succo T, Noël H, Nikolay B, Maquart M, Cochet A, Leparc-Goffart I, Catelinois O, Salje H, Pelat C, de Crouy-Chanel P, de Valk H, Cauchemez S, Rousseau C

Dengue serosurvey after a 2-month long outbreak in Nîmes, France, 2015: was there more than met the eye?

Euro Surveill, 2018; 23(23): . 10.2807/1560-7917.ES.2018.23.23.1700482
Vannice KS, Wilder-Smith A, Barrett ADT, Carrijo K, Cavaleri M, de Silva A, Durbin AP, Endy T, Harris E, Innis BL, Katzelnick LC, Smith PG, Sun W, Thomas SJ, Hombach J

Clinical development and regulatory points for consideration for second-generation live attenuated dengue vaccines.

Vaccine, 2018; 36(24): 3411-3417. 10.1016/j.vaccine.2018.02.062
Katzelnick LC, Harris E

The use of longitudinal cohorts for studies of dengue viral pathogenesis and protection.

Curr Opin Virol, 2018; 29: 51-61. 10.1016/j.coviro.2018.03.004
Montoya M, Collins M, Dejnirattisai W, Katzelnick LC, Puerta-Guardo H, Jadi R, Schildhauer S, Supasa P, Vasanawathana S, Malasit P, Mongkolsapaya J, de Silva AD, Tissera H, Balmaseda A, Screaton G, de Silva AM, Harris E

Longitudinal Analysis of Antibody Cross-Neutralization Following Zika and Dengue Virus Infection in Asia and the Americas.

J Infect Dis, 2018; : . 10.1093/infdis/jiy164
Lauer SA, Sakrejda K, Ray EL, Keegan LT, Bi Q, Suangtho P, Hinjoy S, Iamsirithaworn S, Suthachana S, Laosiritaworn Y, Cummings DAT, Lessler J, Reich NG

Prospective forecasts of annual dengue hemorrhagic fever incidence in Thailand, 2010-2014.

Proc Natl Acad Sci USA, 2018; 115(10): E2175-E218. 10.1073/pnas.1714457115
Frederick J1, Brown AC2, Cummings DA3, Gaydos CA4, Gibert CL5, Gorse GJ6, Los JG4, Nyquist AC7, Perl TM8, Price CS9, Radonovich LJ10, Reich NG2, Rodriguez-Barradas MC11, Bessesen MT12, Simberkoff MS1

Protecting Healthcare Personnel in Outpatient Settings: The Influence of Mandatory Versus Nonmandatory Influenza Vaccination Policies on Workplace Absenteeism During Multiple Respiratory Virus Seasons.

Infect Control Hospital Epidemiol, 2018; 39(4): 452-461. 10.1017/ice.2018.9
Althouse BM, Guerbois M, Cummings DAT, Diop OM, Faye O, Faye A, Diallo D, Sadio BD, Sow A, Faye O, Sall AA, Diallo M, Benefit B, Simons E, Watts DM, Weaver SC, Hanley KA

Role of monkeys in the sylvatic cycle of chikungunya virus in Senegal.

, 2018; 9(1): 1046. 10.1038/s41467-018-03332-7
Smith MK, Solomon SS, Cummings DAT, Srikrishnan AK, Kumar MS, Vasudevan CK, McFall AM, Lucas GM, Celentano DD, Mehta SH

Overlap between harm reduction and HIV service utilisation among PWID in India: Implications for HIV combination prevention.

Int J Drug Policy, 2018; 57: 111-118. 10.1016/j.drugpo.2018.02.007
Salje H, Cummings DAT, Rodriguez-Barraquer I, Katzelnick LC, Lessler J, Klungthong C, Thaisomboonsuk B, Nisalak A, Weg A, Ellison D, Macareo L, Yoon IK, Jarman R, Thomas S, Rothman AL, Endy T, Cauchemez S

Reconstruction of antibody dynamics and infection histories to evaluate dengue risk.

Nature, 2018; 557(7707): 719-723. 10.1038/s41586-018-0157-4
Wesolowski A, Winter A, Tatem AJ, Qureshi T, Engø-Monsen K, Buckee CO, Cummings DAT, Metcalf CJE

Measles outbreak risk in Pakistan: exploring the potential of combining vaccination coverage and incidence data with novel data-streams to strengthen control.

Epidemiol Infect, 2018; : 1-9. 10.1017/S0950268818001449
Ball JD, Prosperi MA, Brown A, Chen X, Kenah E, Yang Y, Cummings DAT, Rivers CM

The role of benzathine penicillin G in predicting and preventing all-cause acute respiratory disease in military recruits: 1991-2017

Epidemiol Infect, 2018; : 1-7. 0.1017/S0950268818001838
Andrade DV, Katzelnick LC, Widman DG, Balmaseda A, de Silva AM, Baric RS, Harris E

Analysis of Individuals from a Dengue-Endemic Region Helps Define the Footprint and Repertoire of Antibodies Targeting Dengue Virus 3 Type-Specific Epitopes.

MBio, 2017; 8(5): . 10.1128/mBio.01205-17.
Katzelnick LC1, Gresh L2, Halloran ME3,4, Mercado JC5, Kuan G6, Gordon A7, Balmaseda A5, Harris E

Antibody-dependent enhancement of severe dengue disease in humans.

Science, 2017; 358(365): 929-932. 10.1126/science.aan6836
Nikolay B, Salje H, Sturm-Ramirez K, Azziz-Baumgartner E, Homaira N, Ahmed M, Iuliano AD, Paul RC, Rahman M, Hossain MJ, Luby SP, Cauchemez S, Gurley ES.

Evaluating Hospital-Based Surveillance for Outbreak Detection in Bangladesh: Analysis of Healthcare Utilization Data.

PLoS Med., 2017; 14(1): . 10.1371/journal.pmed.1002218
Andronico A, Dorléans F, Fergé JL, Salje H, Ghawché F, Signate A, Daudens-Vaysse E, Baudouin L, Dub T, Aubry M, Cao-Lormeau VM, Ledrans M, Noel H, Mallet HP, Fontanet A, Cabié A, Cauchemez S.

Real-Time Assessment of Health-Care Requirements During the Zika Virus Epidemic in Martinique.

Am J Epidemiol., 2017; 186(10): 1194-1203. 10.1093/aje/kwx008.
Arthur RF, Gurley ES, Salje H, Bloomfield LS, Jones JH.

Contact structure, mobility, environmental impact and behaviour: the importance of social forces to infectious disease dynamics and disease ecology.

Philos Trans R Soc Lond B Biol Sci., 2017; 372(1719): pii: 20160. 10.1098/rstb.2016.0454.
Gurley ES, Hegde ST, Hossain K, Sazzad HMS, Hossain MJ, Rahman M, Sharker MAY, Salje H, Islam MS, Epstein JH, Khan SU, Kilpatrick AM, Daszak P, Luby SP.

Convergence of Humans, Bats, Trees, and Culture in Nipah Virus Transmission, Bangladesh.

Emerg Infect Dis. , 2017; 23(9): 1446-1453. 10.3201/eid2309.161922.
Weill FX, Domman D, Njamkepo E, Tarr C, Rauzier J, Fawal N, Keddy KH, Salje H, Moore S, Mukhopadhyay AK, Bercion R, Luquero FJ, Ngandjio A, Dosso M, Monakhova E, Garin B, Bouchier C, Pazzani C, Mutreja A, Grunow R, Sidikou F, Bonte L, Breurec S, Damian M, Njanpop-Lafourcade BM, Sapriel G, Page AL, Hamze M, Henkens M, Chowdhury G, Mengel M, Koeck JL, Fournier JM, Dougan G, Grimont PAD, Parkhill J, Holt KE, Piarroux R, Ramamurthy T, Quilici ML, Thomson NR.

Genomic history of the seventh pandemic of cholera in Africa.

Science. , 2017; 358(6364): 785-789. 10.1126/science.aad5901.
Borchering RK, Bellan SE, Flynn JM, Pulliam JRC, McKinley SA.

Resource-driven encounters among consumers and implications for the spread of infectious disease.

J R Soc Interface., 2017; 14(135): pii: 20170. 10.1098/rsif.2017.0555.
Clapham HE, Cummings DAT, Johansson MA.

Immune status alters the probability of apparent illness due to dengue virus infection: Evidence from a pooled analysis across multiple cohort and cluster studies.

PLoS Negl Trop Dis., 2017; 11(9): e0005926. 10.1371/journal.pntd.0005926
Katzelnick LC, Harris E; Participants in the Summit on Dengue Immune Correlates of Protection.

Immune correlates of protection for dengue: State of the art and research agenda.

Vaccine, 2017; 35(36): 4659-4669. 10.1016/j.vaccine.2017.07.045
Katzelnick LC, Coloma J, Harris E.

Dengue: knowledge gaps, unmet needs, and research priorities.

Lancet Infect Dis, 2017; 17(3): e88-e100. 10.1016/S1473-3099(16)30473-X
Salje H, Lessler J, Maljkovic Berry I, Melendrez MC, Endy T, Kalayanarooj S, A-Nuegoonpipat A, Chanama S, Sangkijporn S, Klungthong C, Thaisomboonsuk B, Nisalak A, Gibbons RV, Iamsirithaworn S, Macareo LR, Yoon IK, Sangarsang A, Jarman RG, Cummings DA.

Dengue diversity across spatial and temporal scales: Local structure and the effect of host population size.

Science, 2017; 355(6331): 1302-1306. 10.1126/science.aaj9384
Grantz KH, Rane MS, Salje H, Glass GE, Schachterle SE, Cummings DAT.

Reply to Shanks and Brundage: Many plausible mechanisms of pandemic mortality disparities.

Proc Natl Acad Sci, 2017; 114(18): E3588-E358. 10.1073/pnas.1703851114
Grubaugh ND, Ladner JT, Kraemer MUG, Dudas G, Tan AL, Gangavarapu K, Wiley MR, White S, Thézé J, Magnani DM, Prieto K, Reyes D, Bingham AM, Paul LM, Robles-Sikisaka R, Oliveira G, Pronty D, Barcellona CM, Metsky HC, Baniecki ML, Barnes KG, Chak B, Freije CA, Gladden-Young A, Gnirke A, Luo C, MacInnis B, Matranga CB, Park DJ, Qu J, Schaffner SF, Tomkins-Tinch C, West KL, Winnicki SM, Wohl S, Yozwiak NL, Quick J, Fauver JR, Khan K, Brent SE, Reiner RC Jr, Lichtenberger PN, Ricciardi MJ, Bailey VK, Watkins DI, Cone MR, Kopp EW 4th, Hogan KN, Cannons AC, Jean R, Monaghan AJ, Garry RF, Loman NJ, Faria NR, Porcelli MC, Vasquez C, Nagle ER, Cummings DAT, Stanek D, Rambaut A, Sanchez-Lockhart M, Sabeti PC, Gillis LD, Michael SF, Bedford T, Pybus OG, Isern S, Palacios G, Andersen KG.

Genomic epidemiology reveals multiple introductions of Zika virus into the United States.

Nature, 2017; 15(7658): 401-405. 10.1038/nature22400
Katzelnick LC, Montoya M, Gresh L, Balmaseda A, Harris E.

Neutralizing antibody titers against dengue virus correlate with protection from symptomatic infection in a longitudinal cohort.

Proc Natl Acad Sci, 2016; 113(3): 728-733. 10.1073/pnas.1522136113
Hladish TJ, Pearson CA, Chao DL, Rojas DP, Recchia GL, Gómez-Dantés H, Halloran ME, Pulliam JR, Longini IM.

Projected Impact of Dengue Vaccination in Yucatán, Mexico.

PLoS Negl Trop Dis, 2016; 10(5): e0004661. 10.1371/journal.pntd.0004661
McLean KE, Abramowitz SA, Ball JD, Monger J, Tehoungue K, McKune SL, Fallah M, Omidian PA.

Community-based reports of morbidity, mortality, and health-seeking behaviours in four Monrovia communities during the West African Ebola epidemic.

Glob Public Health, 2016; Epub ahead of print.: . 10.1080/17441692.2016.1208262

Pages